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Class: CrossSpeciesTermClique

A grouping of species-specific terms (HP, MP, ZP) under a common cross-species parent (UPHENO/UBERON), with associations between them.

URI: https://w3id.org/monarch/monarch-py/CrossSpeciesTermClique

 classDiagram
    class CrossSpeciesTermClique
    click CrossSpeciesTermClique href "../CrossSpeciesTermClique/"
      CrossSpeciesTermClique : clique_associations





        CrossSpeciesTermClique --> "1..*" Association : clique_associations
        click Association href "../Association/"



      CrossSpeciesTermClique : clique_entities





        CrossSpeciesTermClique --> "1..*" Entity : clique_entities
        click Entity href "../Entity/"



      CrossSpeciesTermClique : root_term





        CrossSpeciesTermClique --> "1" Entity : root_term
        click Entity href "../Entity/"

Slots

Name Cardinality and Range Description Inheritance
root_term 1
Entity		 The species-independent grouping term (UPHENO/UBERON) that serves as the cros... direct
clique_entities 1..*
Entity		 Species-specific child terms (HP, MP, ZP, etc direct
clique_associations 1..*
Association		 All associations within this clique: vertical (subclass_of from children to r... direct

Usages

used by used in type used
Node cross_species_term_clique range CrossSpeciesTermClique

Identifier and Mapping Information

Schema Source

Mappings

Mapping Type Mapped Value
self https://w3id.org/monarch/monarch-py/CrossSpeciesTermClique
native https://w3id.org/monarch/monarch-py/CrossSpeciesTermClique

LinkML Source

Direct

name: CrossSpeciesTermClique
description: A grouping of species-specific terms (HP, MP, ZP) under a common cross-species
  parent (UPHENO/UBERON), with associations between them.
from_schema: https://w3id.org/monarch/monarch-py
slots:
- root_term
- clique_entities
- clique_associations
slot_usage:
  root_term:
    name: root_term
    required: true
  clique_entities:
    name: clique_entities
    required: true
  clique_associations:
    name: clique_associations
    required: true

Induced

name: CrossSpeciesTermClique
description: A grouping of species-specific terms (HP, MP, ZP) under a common cross-species
  parent (UPHENO/UBERON), with associations between them.
from_schema: https://w3id.org/monarch/monarch-py
slot_usage:
  root_term:
    name: root_term
    required: true
  clique_entities:
    name: clique_entities
    required: true
  clique_associations:
    name: clique_associations
    required: true
attributes:
  root_term:
    name: root_term
    description: The species-independent grouping term (UPHENO/UBERON) that serves
      as the cross-species bridge
    from_schema: https://w3id.org/monarch/monarch-py
    rank: 1000
    alias: root_term
    owner: CrossSpeciesTermClique
    domain_of:
    - CrossSpeciesTermClique
    range: Entity
    required: true
    inlined: true
  clique_entities:
    name: clique_entities
    description: Species-specific child terms (HP, MP, ZP, etc.) that are subclasses
      of the root term
    from_schema: https://w3id.org/monarch/monarch-py
    rank: 1000
    alias: clique_entities
    owner: CrossSpeciesTermClique
    domain_of:
    - CrossSpeciesTermClique
    range: Entity
    required: true
    multivalued: true
    inlined: true
    inlined_as_list: true
  clique_associations:
    name: clique_associations
    description: 'All associations within this clique: vertical (subclass_of from
      children to root) and horizontal (same_as, homologous_to between children)'
    from_schema: https://w3id.org/monarch/monarch-py
    rank: 1000
    alias: clique_associations
    owner: CrossSpeciesTermClique
    domain_of:
    - CrossSpeciesTermClique
    range: Association
    required: true
    multivalued: true
    inlined: true
    inlined_as_list: true